Which is the best course between B.E computer science and M.Sc software integrated?

A B.E or B.tech degree is always preferred than B.Sc +M.Sc in Indian industry until you plan to go for a research based career. Also, you may think of doing specialization in another field after b.tech as per ur experience so that will give you more options than integrated degree.

Indian IT industry accepts BTEch CSE bit superior to MSc or MCA.